@DiegoAEM

Biólogo 🇨🇴, divulgador y amante de la naturaleza MSc. Biología Animal | PhD Student at @UFRGS 🇧🇷 Bats!! Bats! and mammals 🦇

 Porto Alegre, Brasil
Joined December 2012
  • Tweets170
  • Following363
  • Followers271
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Diego A. Esquivel retweeted
Dr. Laura Bertola@LauraDBertolaOct 19
DNAharvester: A Nextflow Pipeline for Analysing Highly Degraded DNA from Ancient and Historical Specimens academic.oup.com/bioinformat…

DNAharvester: A Nextflow Pipeline for Analysing Highly Degraded DNA from Ancient and Historical...

AbstractMotivation. Ancient DNA (aDNA) research has advanced rapidly with the development of high-throughput sequencing, enabling genome-wide analyses of l

academic.oup.com
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Ming "Tommy" Tang@tangming2005Oct 8
10 courses for my dream bioinformatics curriculum: 1. Unix Commands with Greg Wilson youtube.com/watch?v=U3iNcBty… 2. statistics and R with Rafael Irizarry rafalab.dfci.harvard.edu/pag…
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Dr. Laura Bertola@LauraDBertolaOct 1
Identifying adaptive variation in spatially structured populations using low-coverage whole-genome sequencing data academic.oup.com/mbe/advance…

Identifying adaptive variation in spatially structured populations using low-coverage whole-genome...

Abstract. Successful implementation of evolutionary programs to rescue climatically threatened species requires identification of adaptive variation. Altho

academic.oup.com
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Diego A. Esquivel retweeted
Hoyaboya@Hoyaboya11Aug 25
Dunn (2026-08, Casey W. Dunn) 「系統生物学」 Phylogenetic Biology 動物系統学の大家，Dunn先生による系統学の新たな教科書です！オンライン版は無料公開されています！！ イェール大学の講義で使用されています！ New textbook on phylogenetics (available online for free)!
Casey W. Dunn, CC BY-NC-ND 4.0, https://dunnlab.org/phylogenetic_biology/

ALT Casey W. Dunn, CC BY-NC-ND 4.0, https://dunnlab.org/phylogenetic_biology/

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Diego A. Esquivel retweeted
Ming "Tommy" Tang@tangming2005Aug 24
Here is how I would start learning bioinformatics. 👇 read it in my old chatomics blog: divingintogeneticsandgenomic…
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Diego A. Esquivel retweeted
René Malenfant@ReneMalenfantAug 11
Genetics and genomics of hybridization nature.com/articles/s41576-0…

Genetics and genomics of hybridization

Nature Reviews Genetics - Hybridization, the exchange of genes between divergent lineages, is now recognized as widespread across eukaryotes and essential to understanding genome evolution. In this...

nature.com
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Diego A. Esquivel retweeted
Ming "Tommy" Tang@tangming2005Aug 11
Understand NGS sequencing files bioinf.comav.upv.es/courses/…
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Diego A. Esquivel retweeted
René Malenfant@ReneMalenfantAug 5
Estimation of Contemporary and Recent Effective Population Size from Genomic Data annualreviews.org/content/jo…

Estimation of Contemporary and Recent Effective Population Size from Genomic Data

Effective population size (Ne) is a crucial parameter in the fields of evolutionary biology, conservation biology of endangered species, and selective breeding of domestic animals and crops, as it...

annualreviews.org
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¿Tus modelos de nicho tienen sentido biológico o solo ruido estadístico? 🦜📊 Curso virtual #ACO: Domina las buenas prácticas del Modelado de Nicho Ecológico (MNE) desde cero y sin errores metodológicos. Más que correr un código, es entender la biología detrás del dato. 👇Info
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Ming "Tommy" Tang@tangming2005Aug 3
Agentic genomics: From pipeline automation to autonomous validation cell.com/cell-genomics/fullt… The variant calling steps should be just automated with workflow languages, the variant intepretation part is what I see agents can do better a job (e.g, reading papers)
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Ming "Tommy" Tang@tangming2005Jul 28
Applied Computational Genomics Course at UU: Spring 2024 github.com/quinlan-lab/appli… by the almighty Aaron Quinlan, author of bedtools and many other great tools for genomics analysis.
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Two species. Two climates. One evolutionary story From 317 Vampyrodes skulls, we show how climate shapes morphology, and how the Andes may have driven the divergence in these bats #Evolution #Bats #Morphology link.springer.com/article/10…
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Dr. Laura Bertola@LauraDBertolaApr 15
Deep Learning Reveals Genomic Regions Introgressed between Two Recurrently Hybridizing Lynx Species academic.oup.com/mbe/advance…

Deep learning reveals genomic regions introgressed between two recurrently hybridizing lynx species

Abstract. Recently, diverged species with overlapping distributional ranges have high chances of hybridizing and if hybrids are viable, genomic material ca

academic.oup.com
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Diego A. Esquivel retweeted
Dr. Laura Bertola@LauraDBertolaMar 19
Beyond Geography: Climatic Gradients Shape Reeves's Muntjac Population Structure in Taiwan onlinelibrary.wiley.com/doi/…

Beyond Geography: Climatic Gradients Shape Reeves's Muntjac Population Structure in Taiwan

North–south population split in Reeves's muntjac revealed by genome-wide SNPs. Parallel divergence patterns across mammals in Taiwan suggest shared environmental drivers. Demographic modeling...

onlinelibrary.wiley.com
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Diego A. Esquivel retweeted
Dr. Laura Bertola@LauraDBertolaMar 5
An Evolving View of Species Tree Inference academic.oup.com/sysbio/adva…

An Evolving View of Species Tree Inference

Abstract. Nearly all modern studies that address evolutionary questions require consideration of the phylogenetic relationships among species. But what, ex

academic.oup.com
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Diego A. Esquivel retweeted
Science Magazine
@ScienceMagazineJan 23
In a 2025 Science study, researchers presented CASTER, a tool that uses arrangements in DNA sequences known as site patterns to infer “species trees,” which are diagrams that depict the evolutionary relationships among species. The tool offers transformative potential for evolutionary research. scim.ag/4r9L7eo #ScienceMagArchives
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Diego A. Esquivel retweeted
Evolutionary Genomics@evol_genomicsJan 14
Estimating Genome-Wide Phylogenies Using Probabilistic Topic Modeling academic.oup.com/sysbio/arti… @systbiol

Estimating Genome-Wide Phylogenies Using Probabilistic Topic Modeling

Abstract. Methods for rapidly inferring the evolutionary history of species or populations with genome-wide data are progressing, but computational constra

academic.oup.com
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Diego A. Esquivel retweeted
Evolutionary Genomics@evol_genomicsJan 12
GroupStruct2: A User-Friendly Graphical User Interface for Statistical and Visual Support in Species Diagnosis academic.oup.com/sysbio/adva… @systbiol

GroupStruct2: A User-Friendly Graphical User Interface for Statistical and Visual Support in...

Abstract. Statistically defensible species diagnoses are essential for producing robust taxonomies, which underpin much of biological research. Yet, most s

academic.oup.com
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Diego A. Esquivel retweeted
Ming "Tommy" Tang@tangming2005Jan 12
6 links on workflow to make your life easier 🧵 Bioinformatics analysis involves a lot of steps, 6 links on workflow to make your life easier: 1. over hundreds of workflow tools and engines github.com/pditommaso/awesom…

GitHub - pditommaso/awesome-pipeline: A curated list of awesome pipeline toolkits inspired by...

A curated list of awesome pipeline toolkits inspired by Awesome Sysadmin - pditommaso/awesome-pipeline

github.com
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