Mass spectrometry/Proteomics nerd, who loves to travel and take photographs, but prefers to live in a virtual world.
London, England
Joined September 2014
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As the critical analysis for whatever happened yesterday starts, the fundamental issue that many in America can't stand an assertive woman in a leading position will definitely be the point that won't get addressed..
Bini Ramachandran retweeted
Moving over to Bluesky. Please come and join us over there bsky.app/profile/lpdg.bsky.s… #teammassspec #proteomics
Hello @JProteomeRes, @J_ASMS, please come to the place where skies are blue.. #TeamMassSpec misses your updates..
Bini Ramachandran retweeted
#teamMassSpec If you're in #proteomics or #mass spec and fancy starting or checking out the other place 🦋🟦 here is a good list to start you off, we're getting good representation there without the endless issues of this site.
Starter pack available: go.bsky.app/HH7kqEh
Bini Ramachandran retweeted
Check out the 2024 Emerging Investigators Issue for @J_ASMS. The future of mass spectrometry is definitely in good hands!!
pubs.acs.org/toc/jamsef/35/1…
This is mind boggling!! The analogies it is drawing to explain the basic concepts of proteomics are exemplary.. May be this is the solution to those communication challenges came up in latest episode of #TheProteomicsShow.. Generative AI is awesome..
Getting this on YouTube so you don't need to login to listen to it was way more complex than it needed to be, but I did it :)
youtu.be/bgoRtiwgObY
Spectra for 1536 single cells acquired over 40 SPD Slice-PASEF workflow.. ~40 days of acquisition!
Btw Bruker provides a spectra library?
'Analyses were performed using a library-based approach (spectral library provided by BRUKER containing 67686 proteins and 13827 genes)' 🤔
High throughput single-cell proteomics of in-vivo cells biorxiv.org/content/10.1101/…
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#proteomics #prot-preprint
2024 update from Human Plasma Proteome Project..#HPPP
Always have a soft spot for HPPP updates as it was my PhD prelim writing assignment.. The first draft map was just published as a special issue in the journal Proteomics just in time to compile that assignment.. 🤓
The Circulating Proteome─Technological Developments, Current Challenges, and Future Trends pubs.acs.org/doi/10.1021/acs…
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#proteomics #prot-paper
Bini Ramachandran retweeted
This is great! @NIAIDNews have launched a collection of public domain illustrations (currently 550 individual icons) bioart.niaid.nih.gov/
Apparently, a 1000 spectra per second de novo peptide sequencing tool, novor.cloud/, enabled those diverse antibody sequence mapping generated from those plethora of protease digestions...
News in Proteomics Research blog post \De novo analysis of poly(!!) clonal antibodies from human blood! proteomicsnews.blogspot.com/…
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#proteomics #prot-other
Bini Ramachandran retweeted
Hiring managers want applicants to show passion and dedication, but not overconfidence or exaggerations. A feature from @NatureCareers describes how to walk this line. go.nature.com/3YjMv1o
Bini Ramachandran retweeted
Degrader Tac-opedia
🔘PROTAC: E3 ligase-targeted proteolysis
🔘DUBTAC: Deubiquitinase stabilization
🔘LYTAC: Lysosome-targeted degradation
🔘Trivalent PROTAC: Multivalent E3 ligase
🔘AUTAC: Autophagy-targeted degradation
🔘RIBOTAC: RNA-targeted degradation
🔘RNA-PROTAC: RNA-binding E3 ligase
🔘BioPROTAC: Antibody/peptide proteolysis
🔘Aptamer-PROTAC: Aptamer proteolysis
🔘GlueTAC: Lysosomal traffic & degradation
🔘Peptide-PROTAC: Peptide-based E3 ligase
🔘NanoTAC: Nanobody-based E3 ligase
H/T: Donggeon Kim on the HR app!
Bini Ramachandran retweeted
Congratulations to our co-founder and CTO, Lindsay Pino, for receiving the Rising Star Award from @hupo_org! Her outstanding contributions in research, entrepreneurship and community engagement have expanded the field & breadth of new discovery in proteomics. Well done, Lindsay!
The signs of ageing are when you have to search in Google AI for "List of proteomics data repositories like PRIDE", because there was no way on earth you could recall the name MassIVE to search for a protein detection precedence.. 😤😤🤓
Bini Ramachandran retweeted
Seems like a good time for a list some of my favorite truly #OpenSource #proteomics tools. In no particular order:
1. Comet - The Sequest algorithm for everyone. github.com/uwpr/comet
Bini Ramachandran retweeted
Nice work by Matt @mrwaas and rest of the team to put this protocol together
Protocol for generating high-fidelity proteomic profiles using DROPPS sciencedirect.com/science/ar…
Bini Ramachandran retweeted
Please, RT. The analytical faculty @purduechemistry is holding an informational meeting for prospective graduate students on Mon, Oct 28, at 7:30 pm. purdue-edu.zoom.us/j/9808830…
