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noMapper: A mapping-free natural language processing-based technique for sequence search in nanopore long-reads bmcbioinformatics.biomedcent…
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Thank you to the organisers for the opportunity to present some of my PhD work at @MIGGS_workshop!
Replying to @CamilleMrcht
Now, @teojcryan presents "Exploring de Bruijn Graphs as a Framework for Metagenomic Data Representation"
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Replying to @CamilleMrcht @teojcryan
Mattia Sgro close bacterial pangenomics session with "Pangenome graphs improve bacterial plasmid binning in short-read assemblies"
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Now, @teojcryan presents "Exploring de Bruijn Graphs as a Framework for Metagenomic Data Representation"
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And Matthias Zytnicki with "Assessing genome conservation on pangenome graphs withPanSe"
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Then two researchers from Toulouse, Benjamin Linard with "Simplified pangenome graph traversals with PSSM scoring : search for motifs differentials"
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This afternoon we resume with our second invited speaker @ZaminIqbal who presents challenges in Bacterial pangenomes
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And I was last with "Vizitig: interactive sequence de Bruijn graphs using databases" by my student Bastien Degardins
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Replying to @CamilleMrcht @francois_sabot
Sigfried Dubois presented his work with @ClaireLemaitre "Pangenome graph manipulation for local visualisation with pancat"
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Eloi Durant presented his work with @francois_sabot "Unraveling pangenome graphs with pivot paths and variation glyphs"
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This morning, @astrid_vdbrandt presented "Interactive visualization of large pangenome graphs",
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Alexandra CALTEAU is presenting LABGeM developments on #pangenomics @MIGGS_workshop in Lille
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Nous y ferons une présentation dans la session "Methods"
The registration form for attending the MIGGS symposium is now open at the following link:
miggs.mathnum.inrae.fr/inscr…
Thank you to all the authors for their contributions, which have helped us create this great program.
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Website: miggs.mathnum.inrae.fr/
To submit a presentation : easychair.org/conferences/?c…
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Replying to @GUILLAUMEGAUTRE
@GUILLAUMEGAUTRE is waiting for you at poster 256 at @jobim2024 (Wednesday, June 26, from 11:30 to 12:30 a.m.) to talk about « A workshop on Methods for Interfacing with Graphs of Genomic Sequences ».
@MIGGS_workshop @ThomasDerrien7 @CamilleMrcht #JOBIM2024












