Plant Biologist @ INRA, focus on root nitrogen acquisition, long-distance signaling ....and wish to perform my research in Arabidopsis for as long as possible😉
Montpellier, France
Joined June 2014
- Tweets258
- Following378
- Followers442
- Likes750
Sandrine Ruffel retweeted
Our work on symplastic transport in differentiated roots is now available as a preprint!
🚨 ROOT ALERT! 🚨 My preprint Directional Cell-to-cell Transport in Plant Roots is sprouting soon! 🌱🌿 Discover how symplastic flow occurs in mature roots and what a genetic screen reveals about unidirectional transport in roots 🧬. Spoiler: ⬇️ (1/6)
biorxiv.org/content/10.1101/…
Sandrine Ruffel retweeted
Do you use GWAS in your research?
BionomeeX introduces Next-Gen #GWAS :
✨ Full 2D epistatic maps
⏱️ Rapid evaluation: 60B+ SNP interactions in hours
🌱 Can deploy the technology on any biological model
You can test it with your own Arabidopsis data here ngg-1d.bionomeex.tech/
Sandrine Ruffel retweeted
1/2
Here it is! Validated by @GenomeBiology
The first full #epistatic maps to date with a #gene resolution. paper>genomebiology.biomedcentral.……
You can now run 2D GWAS on your own data thanks to
@BionomeeX
here follow instructions --bionomeex.com/genomic
#GWAS #Genomics
Congratulations to my colleague/friend @lacombebenoit1 who is now part of the Highly Cited Researchers community 👏. In the Plant and Animal Science category, he is one of only 5 French researchers to receive this recognition. Very proud of him. @IPSiM_fr
Sandrine Ruffel retweeted
Today a nice article in @LaTribune in a special issue about #AI concerning the stong momentum in @montpellier_ under the lead of @umontpellier to succeed in the IA-Cluster call.
Paper-> kiosque.latribune.fr/
RT to Support us & click-> tinyurl.com/5n7sbdp7
@manureynaud
Sandrine Ruffel retweeted
It is still hard to believe that Philip Benfey is not with us anymore! He was a true inspiration!
Philip's advice that shaped my career:
"If you want to be an Assistant Professor, go and work with an Assistant Professor to learn every details"
researchgate.net/publication…
In the case of an osmotic shock in roots, do you know if it’s the osmotic potential or if it’s turgor pressure that triggers a response? In this paper, we actually show that it’s both!
doi.org/10.1093/jxb/erad307
Our study, led by Dr. Y. Boursiac, is 100% from @IPSiM4!!
ARSK1 activates TORC1 signaling to adjust growth to phosphate availability. Thanks @hatemrouached for having led this work
sciencedirect.com/science/ar…
Plant Biology Europe meeting will be held in Marseille from July 3 to 6 2023.
europlantbiology2023.org/
Sandrine Ruffel retweeted
Our* take (N&V @NaturePlants ) on the recent discovery of a new nitrate sensor. We also provide some perspectives about the emergence of common features of the structure of important signaling pathways... #nitrate #auxin
Paper here>rdcu.be/cYYPo
*with @JCourregesPhD
Sandrine Ruffel retweeted
Please RT: The Rouached lab at the Plant Resilience Institute, @MSU_PSM, is seeking a highly motivated post-doctoral researcher to discover new mechanisms that protect plant nutrition from the effects of climate change.
To apply: careers.msu.edu/cw/en-us/job…
Sandrine Ruffel retweeted
If you need a method to extract hormones and RNA simultaneously from a small amount a tissue, check out the method we developed 👇🏼
Check out today's #PlantSci protocol ! 🌱🧪
Extract and quantify plant hormones + RNA from pea axillary buds
👉bit.ly/3CHCQrM
By @davidcao666, @FrannyBarbs, Kaori Yoneyama, and @cabeveridge29 from @Ehime_Univ and @CoEPlantSuccess
ALT The setup of solid phase extraction manifold with Sep-Pak tC18 cartridge.
Sandrine Ruffel retweeted
Check out our preprint where we develop a straightforward (SYMPL) cloning toolbox to visualize #PPI and #kinase activity in planta based on #phase #separation. It enables sensitive detection at high signal/noise ratio in different subcellular compartments
biorxiv.org/content/10.1101/…
Sandrine Ruffel retweeted
1/n. We did not know the amount of work needed (~7y) to reach this point but here we are. We developped an analysis pipeline to make full #epistatic maps (>60 billion interactions) with gene resolution in #Arabidopsis. Sort of 2D #GWAS.
biorxiv.org/content/10.1101/…
Sandrine Ruffel retweeted
The peptide SCOOP12 acts on reactive oxygen species homeostasis to modulate cell division & elongation in #Arabidopsis primary #root bit.ly/3BtQ5fk Marie-Charlotte Guillou, Sébastien Aubourg, Jean-Pierre Renou and colleagues @Emersys_IRHS @agrocampusouest
Sandrine Ruffel retweeted
Plant Sci Research Weekly -- NLP7-CRF-PIN, the nitrate-cytokinin-auxin crosstalk module conveys root nitrate signals and regulates shoot growth adaptive responses ((PNAS) @BenkovaGroupIST @nitric25 @lacombebenoit1 (Summary by Lekshmy Sathee @lekshmysnair) buff.ly/3CAIJaD
Sandrine Ruffel retweeted
Everybody knows #AlphaFold. It provides 3D structure from protein prim. seq. With @AntoineLiutkus @ClemSquare et Baldwin Dumortier we thought it might be cool to ask #AI models to reconstruct a protein sequence from a 3D structure. #PetriBert can do this
biorxiv.org/content/10.1101/…
