🚨Update to the CZ ID Nanopore metagenomics workflow!
Now it detects and automatically concatenates files into one per sample for you!! 🎉
Shout out to @RobAboukhalil for making this happen 🙌
#nanopore #metagenomics
czid.org
Just watched an incredible lecture by @Bioinfodotca on antimicrobial resistance gene (AMR) analysis. Mind-blown by the insights shared!
If you're interested in tackling the #AMR challenge, check out the video: youtu.be/FvOCDlcYaTo. #resistome 🧬💪
LC23: Lara Urban, PI at Helmholtz AI Institute, gave a wide ranging talk on real-time metagenomics of environmental and clinical samples for One Health applications. Vision for accessibility, equity and inclusion for LMICs #NanoporeConf @LaraUrban42
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LC23: Hanlee Ji, Professor at Stanford, talked about tumor single cell short read gene expression paired w/ long read coding to detect pathogenic mutations/rearrangements, CRISPR or base editing with adaptive sampling #NanoporeConf @nanopore @Stanford
LC23 Day 1: Fantastic talk by Helen Webb, Group Product Manager at Genomics England, about using long read sequencing in cancer patients to detect gene fusions and methylation at promoters (BRCA1, RAD51C) @nanopore @GenomicsEngland #NanoporeConf
🇬🇧I’ve been working on bioinformatics software for #Nanopore data for a couple years, but it’s my first time at London Calling!! Will be sharing the latest on #bioinformatics #microbiology #metagenomics #singlecell and #genomes🧬 #NanoporeConf
Replying to @SeSimmonds @nanopore
🦠Learn more about the CZ ID #nanopore #metagenomics pipeline and initial benchmarking results is this video.🦠
youtube.com/watch?v=cpf5jsIH…
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