Kathryn Campbell (@ThatKatC) header
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Training Coordinator at Edinburgh Genomics🔬🧬👩‍🔬 Badminton player and women’s sport advocate 🏸🏃‍♀️

Glasgow, Scotland
Joined October 2019
Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)Photo by Kathryn Campbell (@ThatKatC)
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Showing off your first publication to your family
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📢A super exciting new course covering both lab skills 👩‍🔬 AND bioinformatics 💻- you won't find a course like this anywhere else! Learn full-length 16S sequencing with PacBio! 🧬 📅 April 8-9 (Lab), April 15-16 (Online Bioinformatics) 🔗 Register now: genomics.ed.ac.uk/event/full…
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Master Variant Analysis! Join our online course (17–20 March 2025) to learn germline & somatic variant calling with the GATK pipeline. Hands-on training with Edinburgh Genomics experts! 📅 17–20 March 2025 | 🖥️ Online | 🔗 Register now: genomics.ed.ac.uk/event/vari…
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PhDs discussing their progress
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🎓 We just wrapped up another successful R for Biologists! Participants learned R basics, data manipulation, and creating publication-ready plots. 📊 Missed out? Register now for the next session: genomics.ed.ac.uk/event/r-fo… #RforBiologists #Bioinformatics
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🎉 Start 2025 with new skills! Join our DNA Library Preparation for Short-Read Sequencing course. 📅 6th Feb 2025 📍 Edinburgh Genomics 🔬 Hands-on lab work, MiSeq demo, and more! Limited spots—register now: genomics.ed.ac.uk/event/dna-… #Genomics #DNASequencing #HappyNewYear2025 🎆
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— Franz Kafka, 1912
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2024 was an incredible year at Edinburgh Genomics! 🎉 Thank you for your support as we pushed boundaries in #sequencing, advanced #bioinformatics, and impactful #training courses. 🎥 Check out our ‘2024 #Wrapped’ video to celebrate with us! Here’s to an even brighter 2025! 🚀
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🚀 Kickstart your coding journey in 2025 with our introductory courses this January! 📅 ✅ R for Biologists ✅ Intro to Python ✅ Linux for Genomics 📍 Perfect for biologists & genomic scientists—boost your research skills! 🔗 Sign up now: genomics.ed.ac.uk/service/tr…
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Last week, we hosted our amazing Long-Read Bioinformatics course, covering QC, mapping, de novo assembly, structural variation, and methylation. 🧬 We hope you loved it! Missed out? Register for the next session here: genomics.ed.ac.uk/event/intr… #Bioinformatics #Genomics #longread
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We love this photo of our wonderful EdGe members, Ana and Helen, showing off our lab #Sustainability award from @EdSust! 💚 We're incredibly proud to work toward a #sustainable future and thrilled to see our team’s hard work recognised on this journey! #SustainabilityInScience
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Today we're talking about #Kinnex - unlocking the full potential of microbiome research with @PacBio #16S #HiFi #Sequencing 🌟 With PacBio Revio and Kinnex we offer groundbreaking 16S rRNA full gene sequencing, advancing microbiome research beyond traditional short-reads
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Did you know that microwaving to burst open cells can be a useful method of DNA extraction, especially for cheap, rapid, and high-throughput workflows? It can be used as a step within the extraction process to improve cell lysis, and also as the main cell lysis process to produce a crude DNA extract for PCR. An early example was published by Goodwin & Lee (1993), and was used on a wide range of taxa across different kingdoms of life: ⭐Goodwin & Lee (1993). Microwave miniprep of total genomic DNA from fungi, plants, protists and animals for PCR. Biotechniques, 15(3), 438-441. buff.ly/3UJf1IJ Since then, researchers have regularly published variations or instances of this method for specific applications. Below are a few examples 👇 ⭐DNA extraction from human samples (saliva, blood, semen) for forensics: Taglia et al. (2022). Development of a microwave-based extraction for forensic biological samples. Forensic Science International: Synergy, 5, 100291. buff.ly/3UGJcjY ⭐High throughput DNA extraction from barley seeds for genotyping, using microwaving in an alkaline buffer followed by neutralisation with a Tris-HCl buffer, allowing processing of thousands of seeds per day: Von Post et al. (2003). A high-throughput DNA extraction method for barley seed. Euphytica, 130, 255-260. buff.ly/40DZj5C ⭐Microwaving dry fungal spores to pop them open prior to direct PCR: Ferreira et al. (1996). PCR from fungal spores after microwave treatment. Fungal Genetics Reports, 43(1), 25-26. buff.ly/3UCKgFu ⭐Microwaving ground mosquitos, in which it was found to produce comparable results to much more time-consuming extraction methods: Firmansyah et al. (2023). Comparison of 3 DNA extraction methods for extracting DNA from an adult Culex quinquefasciatus (Diptera: Culicidae). Journal of Insect Science, 23(5), 15. buff.ly/40DZjCE Image shows a microwave oven, CC BY-SA Mk2010, buff.ly/2K169f4 Do you use microwaving as part of your DNA extractions? If you do, we'd love to hear about how it works for you!
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🎃Happy Halloween from Edinburgh Genomics! 🎃 Found something spooky or paranormal in your lab? Send it to us for sequencing! We'll turn that ghost into a genome 👻🧬 #Halloween #sequencing #genome
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🎉🎂Happy Birthday Revio!🎂🎉 #birthday #celebrate @PacBio 🧵7/8
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🎉We’re celebrating one year of @PacBio Revio at Edinburgh Genomics!🎉 ⭐️Learn about Revio, and the amazing and varied work our team has been carrying out in this short thread 🧵 (plus a super special photo at the end!) 🧵1/8
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Thrilled to announce we have received the Silver Social Responsibility and #Sustainability Lab Award from @EdSust! 🎉 Huge credit to our incredible team for their dedication to advancing @EdinburghUni's mission of creating a more #sustainable world through all our activities🌍💚
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