Home of the TechBio community. LoGG/M2D2/CARE reading groups, blogs, events, and more.

Joined December 2023
In June, we hosted the molecular machine learning conference @Mila_Quebec With 180+ attendees and 45+ posters, it was amazing to see the progress in ML research for drug discovery. Thank you everyone for a great conference! See you at the next MoML 👋 moml.mit.edu
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Portal retweeted
I'll be hosting Jeremy Ash from the Polaris Small Molecule Steering Committee in 30 minutes to discuss the latest guidelines on method comparison for ML in drug discovery. Join live on @_portal_: portal.valencelabs.com/event…
How should we compare machine learning methods in drug discovery? In the first working paper from the Small Molecule Steering Committee at Polaris, we introduced guidelines for method comparison to help ensure fair, replicable, and rigorous evaluations in ML-driven drug discovery. Now, we’re taking the conversation LIVE! 📅 When: Dec 5th from 11 - 12 PM ET 🎥 Where: portal.valencelabs.com/event… Join host @hsu_jonny from @valence_ai / @RecursionPharma and first author Jeremy Ash from @JNJNews for an interactive session where we’ll: ✅ Explore the key points from the paper ✅ Discuss its implications for the field ✅ Open the floor to your questions and ideas Let’s work together to redefine how method comparison is done!
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Watch the recording of this week’s LoGG Talk with Lazar Atanackovic here: youtu.be/-4Av5IEc_Wc?si=GwNi…
Next Monday at 12 pm ET, Lazar Atanackovic will join LoGG host Hannes Stark to discuss modeling the continuous evolution of interacting biological systems using Meta Flow Matching (MFM). 📄 Read the paper: arxiv.org/abs/2408.14608 ⏺️ Tune in live: zoom.us/j/5775722530?pwd=Zzl…
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Next Monday at 12 pm ET, Lazar Atanackovic will join LoGG host Hannes Stark to discuss modeling the continuous evolution of interacting biological systems using Meta Flow Matching (MFM). 📄 Read the paper: arxiv.org/abs/2408.14608 ⏺️ Tune in live: zoom.us/j/5775722530?pwd=Zzl…
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Learning on Graphs and Geometry (LoGG) is a weekly reading group covering all things related to graph learning hosted by Hannes Stark. Interested in presenting your work? Contact us: portal.valencelabs.com/logg
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Watch the recording of this week’s LoGG Talk with Ali Saberi here: youtu.be/JaDkn0cPzUE
Next Monday at 12 pm ET, Ali Saberi will join LoGG host @HannesStaerk to discuss LoRNASH, a foundation model that decodes how unspliced pre-mRNA sequences shape transcriptome architecture. 📄 Read the paper: biorxiv.org/content/10.1101/… ⏺️ Tune in live: zoom.us/j/5775722530?pwd=Zzl…
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In last week’s newsletter, we cover all things on proteins inspired by round 2 of @adaptyvbio's protein design competition, from one-shot design of protein binders, sequence-structure co-generation for protein design, and more! Read below👇 m2d2.substack.com/p/portal-w…
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Portal Weekly is a newsletter covering the latest developments in TechBio. Receive curated research insights, community events, and cutting-edge tools, every Friday, directly to your inbox. Subscribe here: m2d2.substack.com/
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Next Monday at 12 pm ET, Ali Saberi will join LoGG host @HannesStaerk to discuss LoRNASH, a foundation model that decodes how unspliced pre-mRNA sequences shape transcriptome architecture. 📄 Read the paper: biorxiv.org/content/10.1101/… ⏺️ Tune in live: zoom.us/j/5775722530?pwd=Zzl…
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Learning on Graphs and Geometry (LoGG) is a weekly reading group covering all things related to graph learning hosted by Hannes Stark. Interested in presenting your work? Contact us: portal.valencelabs.com/logg
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In last week’s newsletter, we covered building virtual cells, mapping smell with deep learning, understanding protein sequence landscapes, and more! Read below👇 m2d2.substack.com/p/portal-w…
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Portal Weekly is a newsletter covering the latest developments in TechBio. Receive curated research insights, community events, and cutting-edge tools, every Friday, directly to your inbox. Subscribe here: m2d2.substack.com/
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Next Monday at 12 pm ET, @cdomingoenrich will join LoGG host @HannesStaerk to discuss stochastic optimal control (SOC) and a new algorithm named Adjoint Matching. 📄 Read the paper: arxiv.org/abs/2409.08861 ⏺️ Tune in live: zoom.us/j/5775722530?pwd=Zzl…
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Learning on Graphs and Geometry (LoGG) is a weekly reading group covering all things related to graph learning hosted by Hannes Stark. Interested in presenting your work? Contact us: portal.valencelabs.com/logg
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In this week’s newsletter, we covered platforms that make protein modelling more accessible to biologists, LLMs for single-cell data analysis, evaluation frameworks for protein models, and more! Read below👇 open.substack.com/pub/m2d2/p…
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Portal Weekly is a newsletter covering the latest developments in TechBio. Receive curated research insights, community events, and cutting-edge tools, every Friday, directly to your inbox. Subscribe here: m2d2.substack.com/
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Next Monday at 12pm ET, @brekelmaniac will join LoGG host @HannesStaerk to discuss Sequential Monte Carlo (SMC) for probabilistic inference problems. 📄 Read the paper: arxiv.org/abs/2404.17546 ⏺️ Tune in live: zoom.us/j/5775722530?pwd=Zzl…
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Learning on Graphs and Geometry (LoGG) is a weekly reading group covering all things related to graph learning hosted by Hannes Stark. Interested in presenting your work? Contact us: portal.valencelabs.com/logg
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On Monday at 12 pm ET, @lovrovrcek joined LoGG host @HannesStaerk to discuss his work on GNNome, a framework for path identification that enables training without relying on existing assembly strategies 📄 Read the paper: biorxiv.org/content/10.1101/…
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Watch the recording of this week’s LoGG Talk with @lovrovrcek here: youtu.be/a-9dQofSgCU?si=i-Ex…
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Learning on Graphs and Geometry (LoGG), is a weekly reading group covering all things related to graph learning hosted by Hannes Stark. Interested in presenting your work? Contact us: portal.valencelabs.com/logg
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