Masayoshi Itoh (@maitoh) profile picture

Masayoshi Itoh

@maitoh

This is my scientific news tweeting account in English and Japanese.

 Tokyo and Yokohama, Japan
blog.goo.ne.jp/masaca/
Joined November 2009
  • Tweets2.1K
  • Following169
  • Followers138
4Media
Photo by Masayoshi Itoh (@maitoh)Photo by Masayoshi Itoh (@maitoh)
Long-read single-molecule RNA structure sequencing using nanopore | NAR doi.org/10.1093/nar/gkac775
Long-read single-molecule RNA structure sequencing using nanopore

Long-read single-molecule RNA structure sequencing using nanopore

Abstract. RNA molecules can form secondary and tertiary structures that can regulate their localization and function. Using enzymatic or chemical probing t

academic.oup.com
New Direct Nanopore Sequencing Method Expands Toolkit for RNA Structure Profiling | GenomeWeb genomeweb.com/sequencing/new…

New Direct Nanopore Sequencing Method Expands Toolkit for RNA Structure Profiling

SMS-seq combines structural probing with direct RNA nanopore sequencing, offering researchers a new way to study RNA structure at the single-molecule level.

genomeweb.com
Multiplexed, single-molecule, epigenetic analysis of plasma-isolated nucleosomes for cancer diagnostics. doi.org/10.1038/s41587-022-0…

Multiplexed, single-molecule, epigenetic analysis of plasma-isolated nucleosomes for cancer...

Nature Biotechnology - Single-molecule imaging of cell-free nucleosomes detects colorectal cancer with high accuracy and sensitivity.

nature.com
1
SEQLL ANNOUNCES PEER-REVIEWED PUBLICATION OF NOVEL SINGLE-MOLECULE LIQUID BIOPSY METHOD IN NATURE BIOTECHNOLOGY investors.seqll.com/news-rel…
1
A metagenomic DNA sequencing assay that is robust against environmental DNA contamination. nature.com/articles/s41467-0…

A metagenomic DNA sequencing assay that is robust against environmental DNA contamination

Nature Communications - The accuracy of metagenomic DNA sequencing is limited by environmental DNA contamination. Here, the authors develop and test SIFT-seq, a metagenomic DNA sequencing assay...

nature.com
New Sequencing Method Tackles Environmental DNA Contamination for Cell-Free DNA Samples | GenomeWeb genomeweb.com/sequencing/new…

New Sequencing Method Tackles Environmental DNA Contamination for Cell-Free DNA Samples

The approach aims to discern environmental DNA contamination by chemically tagging sample-intrinsic cfDNA prior to DNA extraction using bisulfite salt treatment.

genomeweb.com
Comparing the accuracy and efficiency of third generation DNA barcode sequencing: Oxford Nanopore Technologies versus Pacific Biosciences. doi.org/10.1101/2022.07.13.4…
1
Nanopore Sequencing Fares Well in DNA Barcoding Head-to-Head With Pacific Biosciences | GenomeWeb genomeweb.com/sequencing/nan…

Nanopore Sequencing Fares Well in DNA Barcoding Head-to-Head With Pacific Biosciences

A new comparative study by the Natural History Museum in London showed both technologies are suitable for DNA barcode sequencing to help identify species.

genomeweb.com
Estimation of tumor cell total mRNA expression in 15 cancer types predicts disease progression. nature.com/articles/s41587-0…
Estimation of tumor cell total mRNA expression in 15 cancer types predicts disease progression

Estimation of tumor cell total mRNA expression in 15 cancer types predicts disease progression

Nature Biotechnology - Total mRNA expression in cancer cells is a marker for disease progression and death.

nature.com
High-throughput, single-microbe genomics with strain resolution, applied to a human gut microbiome. doi.org/10.1126/science.abm1…
Sweden's Aplex Bio Gearing up to Launch 'Hyperplexed' PCR Platform genomeweb.com/pcr/swedens-ap…

Sweden's Aplex Bio Gearing up to Launch 'Hyperplexed' PCR Platform

Aplex Bio believes its technology has the sensitivity, specificity, and scale to challenge both digital PCR and next-generation sequencing-based applications.

genomeweb.com
Twitterに登録した日を覚えていますか？#MyTwitterAnniversary
Image from Masayoshi Itoh (@maitoh)
US Federal Court Judge Rules BGI Sequencing Chemistries Infringe Illumina Patents genomeweb.com/sequencing/us-…

US Federal Court Judge Rules BGI Sequencing Chemistries Infringe Illumina Patents

In an order issued Thursday, Judge William Orrick of the US District Court for the Northern District of California awarded Illumina's request for summary judgement and rebuffed BGI's counterclaim.

genomeweb.com
PROPER-Seq Uses NGS to ID Undiscovered Protein-Protein Interactions | GenomeWeb genomeweb.com/proteomics-pro…

PROPER-Seq Uses NGS to ID Undiscovered Protein-Protein Interactions

The method, which can scan for interactions across a cell's entire proteome, is drawing interest from entities looking to both use and commercialize it.

genomeweb.com
Polθ reverse transcribes RNA and promotes RNA-templated DNA repair advances.sciencemag.org/cont…
1
The complete sequence of a human genome biorxiv.org/content/10.1101/…
Nanopore Sequencing Firm Armonica Technologies Progresses Towards Single-Base Detection. genomeweb.com/sequencing/nan…

Nanopore Sequencing Firm Armonica Technologies Progresses Towards Single-Base Detection

The firm will use a new SBIR grant to put together a data package to use in fundraising as it develops a viable Raman spectroscopy-based sequencing instrument.

genomeweb.com
Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems dx.doi.org/10.1126/science.a…

Expansion sequencing: Spatially precise in situ transcriptomics in intact biological systems

An adaptation of expansion microscopy allows in situ sequencing and multiplexed subcellular mapping of RNAs.

science.org
Expansion Sequencing Improves on Church Lab's In Situ Transcriptomics Method genomeweb.com/sequencing/exp…

Expansion Sequencing Improves on Church Lab's In Situ Transcriptomics Method

Researchers have developed a higher-resolution in situ RNA sequencing method that relies on physically expanding a polymer network that holds the RNA.

genomeweb.com
Functional annotation of human long noncoding RNAs using chromatin conformation data. biorxiv.org/cgi/content/shor…
1
1
Load more