Group Leader, Human Origins Cluster of Excellence, University of Tübingen | Editor, Hunter Gatherer Research | Evolutionary Ecologist 🌻🧬🌍

Tübingen, Deutschland
Joined October 2017
🚨FULLY FUNDED PHD POSITION!🚨 If you are interested in addressing the question of "How did climate shape the movements, interactions, and evolution of hominin populations?" Come join my lab at the Human Origins Excellence Cluster in Tübingen🧬🧪. Details: uni-tuebingen.de/universitae…
2
21
53
4,338
This is a super cool approach to measure the structure of genetic variation
Fst is a key genetic differentiation metric, but it emphasizes common variants over rare. In @ieeeICASSP out now @geletavc introduces Fq, which can be tuned across the allele freq spectrum. Fst & Shannon differentiation fall out of it as special cases. arxiv.org/abs/2511.03063
3
12
657
Cecilia Padilla-Iglesias retweeted
Archaic human parents also had a hard time raising kids. Deformed head shapes in fossilized humans show their infants were probably just as helpless as modern human babies, requiring constant parental care: eurekalert.org/news-releases…
1
10
2
58
2,988
Cecilia Padilla-Iglesias retweeted
ARGformer is out in Bioinformatics! doi.org/10.1093/bioinformati… Just as PCA produces a low-dimensional representation of population structure from genotypes, ARGformer can do this now for ARGs...a representation that comes now directly from inferred genealogical topologies & at a haplotype level across each individual's genome. We do this by turning local genealogical paths into tokens & learning dense embeddings, similar to language embeddings, to visualize, cluster & query. Code github.com/AI-sandbox/ARGfor… Team @d_bonet, Cole Shanks, @marcal_cc, @jordiatjhu
19
2
67
8,078
Fantastic paper testing potential effects of cousin marriage on intimate partner violence. Have a read!
3
318
Cecilia Padilla-Iglesias retweeted
New: @JoanSaurina and @alexGioannidis improve on the ADMIXTURE family of methods with a modified EM algorithm utalizing ideas from machine learning that maintains a sort of momentum when optimizing components, resulting in insane (<10hrs for K=50 on UKBB🤯) speedups 1/3
1
14
1
45
9,791
Cecilia Padilla-Iglesias retweeted
🧬We are born with hundreds of de novo DNA mutations that were not present in genomes of our parents. But why do some people have more of them than others? In a new preprint the authors analyzed 28,985 sibling pairs and identified more than 800,000 de novo mutations. The main factor is parental age especially paternal age with about 1.5 extra mutations per year of the father’s age and 0.4 per year of the mother’s age The authors did not find convincing evidence that the total number of de novo mutations is associated with genetic ancestry or parental smoking The most interesting part is rare variants in DNA repair and replication genes. Disruptive variants in REV1 were associated with about a 16% increase in the total mutation rate while variants in LIG1 were linked to a 24 to 26% increase in CpG to TpG mutations A key feature of the study was the analysis of IBD-segments in siblings genomic regions that both children inherited from the same parental chromosomes. Differences within these regions can point to new mutations. biorxiv.org/content/10.64898… #deNovo #mutations #reparation #inheritance #siblings
9
65
8
268
26,106
Cecilia Padilla-Iglesias retweeted
Pan-African model explains Homo sapiens genetic and morphological evolution (preprint) biorxiv.org/content/10.1101/…
1
17
72
2,865
Cecilia Padilla-Iglesias retweeted
🚨FULLY FUNDED PHD POSITION!🚨 If you are interested in addressing the question of "How did climate shape the movements, interactions, and evolution of hominin populations?" Come join my lab at the Human Origins Excellence Cluster in Tübingen🧬🧪. Details: uni-tuebingen.de/universitae…
2
21
53
4,338
Cecilia Padilla-Iglesias retweeted
2
12
1
34
7,892
Cecilia Padilla-Iglesias retweeted
"Hybridization in Animal Evolution" doi.org/10.32942/X21380
31
1
89
9,140
Cecilia Padilla-Iglesias retweeted
Want to do an experimental PHD on the evolution of human language? Only one more week left to submit your application!
I'm hiring! 📢 Come work with me on how different social pressures shape the evolution of new communication systems in the lab! Deadline for application is May 18th! mpi.nl/career-education/vaca…
8
8
2,510
Feel free to write to me if you have any questions. Deadline to apply is the 7th of June!
6
348
Cecilia Padilla-Iglesias retweeted
From diversity to flexibility: Seasonality as the forgotten dividend of Man the Hunter sciencedirect.com/science/ar…
4
7
1,315
Cecilia Padilla-Iglesias retweeted
Malaria was fundamental in shaping the course of human evolution, @CamZoology researchers have found. From 74,000 to 5,000 years ago, early humans in Africa did not live in high-risk malaria areas. This shaped how populations met and mixed, leading to the population structure seen today. Read more about this new study in collaboration with the Max Planck Institute of Geoanthropology @MPI_GEA 👉 bit.ly/4e2V2PI
1
48
3
138
20,025