@ColinMPalmer

Computational structural biologist at @ccp_em. Also on Mastodon at @colinpalmer@struct.bio

 UK
Joined January 2017
  • Tweets121
  • Following355
  • Followers267
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Join us for this wonderful international practical school. Great speakers and tutors. Register now school2025.cristallografia.o… #cryoEM #structural_biology #crystallography @AICryst @UniPadova
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Colin Palmer retweeted
Rado Danev@RadoDanev7 Nov 2022
The 2023 #3DEM #GRC is open for applications and we are now starting to periodically review them. To improve the chances of being accepted, please provide a title and a short abstract of you poster!📜✍️🙂👍 grc.org/three-dimensional-el…
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Seeking a postdoc to build super-resolution cryo-fluorescence microscope (#CLEM, #teamtomo) in collaboration with Huang group of #PurdueEngineering. Info and application at engineering.purdue.edu/Engr/…. Please RT!

Correlated super-resolution cryo-fluorescence microscopy and electron microscopy

engineering.purdue.edu
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Colin Palmer retweeted
Meghna Gupta@MeghnaG2720 Aug 2022
Early announcement: Me and my co-chair @Navarro_PaulaP are going to start putting the program outline together for 3DEM GRS 2023 @GordonConf #3DEM. Speakers will be selected from abstracts submitted by December 12, 2022. Looking forward to your abstracts! grc.org/three-dimensional-el…
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CCPEM symposium 2022 "Map post-processing with DeepEMhancer" Ruben Sanchez-Garcia ccpemss.co.uk/schedule/ My concern over "hallucination" of neural networks persists. I recommend people to use this only for map interpretation, not for refinement!!!
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Colin Palmer retweeted
CCP-EM@ccp_em4 May 2022
First day of the CCP-EM Symposium #ccpemss starting with What's New @ccp_em, eBIC @DiamondLightSou , @RosFrankInst & @EMDB_EMPIAR . Huge thanks as well to our fantastic scientific organisers Doryen Bubeck @BubeckLab & Paula da Fonseca gla.ac.uk/researchinstitutes…
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If you want to do something to help the situation in Ukraine 🇺🇦 and you're not sure how to help, please consider donating to this fundraiser to support grassroots humanitarian relief for people in Kharkiv: helpforkharkiv.wordpress.com
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My friend Masha is helping to run it. She's currently in Poland volunteering as an interpreter helping Ukrainian refugees. They're working closely with local groups delivering food and medical supplies to people in Kharkiv so your money is going directly to a very valuable cause.
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Colin Palmer retweeted
CCP-EM@ccp_em4 Jan 2022
Interested in leading your own cryo-EM software group? Check out the vacancy at eBIC @DiamondLightSou below! You'll have access to great facilities and collaborations including us at @ccp_em and our colleagues at @RosFrankInst and @ePSIC_DLS .
Martin Walsh OBE@MartinWalshDLS4 Jan 2022
Looking for a new challenge or opportunity...look no further ...An exciting Group Leader position in CryoEM software development at eBIC is now available! #cryoEM vacancies.diamond.ac.uk/vaca… @instructhub @iNEXT_Discovery @ccp_em @ccp4_mx
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Colin Palmer retweeted
CCP-EM@ccp_em4 Jan 2022
There's still time to register for the #CCP4SW event this week! Learn about the latest developments in atomic model refinement and validation. Find the programme and registration details at the link below 👇
ccp4_mx@ccp4_mx1 Dec 2021
Registration for the virtual #CCP4SW is still open and we have unlimited numbers. The whole #CCP4SW can be seen virtually so find out more and register now at cvent.me/YPqVd0
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Colin Palmer retweeted
Alan Lowe@quantumjot20 Dec 2021
JOB ALERT: We have an exciting new PDRA position as part of a collaboration between @turinginst and @rosfrankinst. This is an amazing opportunity to develop #AI methods for large-scale cryo-EM/ET image datasets. 🚀 Please RT. DEADLINE: 23rd Jan 2022 cezanneondemand.intervieweb.…

Research Associate, Molecular Biology

The Environment and Sustainability research initiative funded through the AI for Science and Government research programme (ASG) at The Alan Turing In

cezanneondemand.intervieweb.it
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Colin Palmer retweeted
Mark Basham@basham_mark15 Jun 2021
We are #Hiring! If you would class yourself as a #RSE @ResearchSoftEng and would like to come and work with me and my amazing team at the @RosFrankInst, tackling the management, processing and analysis of all the data that we collect, then take a look. opportunities.rfi.ac.uk/vaca…
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Clearly there are not enough electron microscopists involved in this poll
This Post is from an account that no longer exists. Learn more
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Colin Palmer retweeted
bioRxiv@biorxivpreprint5 May 2021
Cryo-EM single particle structure refinement and map calculation using Servalcat biorxiv.org/cgi/content/shor… #bioRxiv
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Thanks to @ColinMPalmer, the "mrcfile" Python packages now supports float16 (mode 12) MRC files. github.com/ccpem/mrcfile

GitHub - ccpem/mrcfile: A Python implementation of the MRC2014 file format

A Python implementation of the MRC2014 file format - ccpem/mrcfile

github.com
とりさん@biochem_fan2 Feb 2021
RELION float16 branch FOR DEVELOPERS: github.com/3dem/relion/commi… This will be merged into RELION 3.2, not 3.1. In this branch, all programs can read float16 MRC files. MotionCorr, Extract, Polish and relion_image_handler can write float16 with --float16. The default remains float32
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2021 3DEM GRC/GRS meetings are rescheduled. GRS for 30-31 October, 2021 and GRC for 31 October to 5 November 2021, at the Jordan Hotel, in Sunday River, Maine, USA. @GordonConf website will be updated this week.
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Colin Palmer retweeted
Alister Burt@AlisterBurt2 Feb 2021
Optimal cryo-ET and subtomogram averaging workflows can be a pain - we put together a little toolkit which simplifies working between Warp-RELION-M and Dynamo, providing automation where possible and more flexibility if needed! 1/n biorxiv.org/content/10.1101/…
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1) Fantastic opportunity for a #cryoEM scientist who craves access to state-of-the-art high-end cryoEM microscopes to forward their research and who has a passion for teaching and training the next generation of structural biologists in CryoEM! join us at eBIC!:
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Unfortunately the re-scheduled 3DEM GRC for June 2021 is also cancelled due to the pandemic. GRC says all meetings planned between May and July 2021 are cancelled. We will work with the GRC for alternatives, and I will keep you posted through Twitter and the 3DEM mailing list.
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CoVal is a repository of amino acid replacement mutations identified in the SARS-CoV-2 genome sequences, mapped onto the cryo-EM derived protein structures coval.ccpem.ac.uk/
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