Engineering Biology for Industrial Scale-Up

geneplumber.bsky.social
Joined August 2013
Darren N. Nesbeth retweeted
Ok let me explain how cool this is from my perspective , please RT! I developed one of the first methods to probe RNA structure in high throughput inside living cells, and it takes tons of time and $$ to apply on thousands of viruses - it’s practically impossible. This ML approach is just as good and works in seconds for nearly free ! Not only that, it highlights the MOST IMPORTANT structures that track with function. It’s the future of RNA strucute prediction and discovery across all families 🔥 biorxiv.org/content/10.64898…
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Darren N. Nesbeth retweeted
MICROSCOPY. Making the invisible visible since 1590. (Yes, those little white balls are actually immune cells flowing through the tinniest blood vessels! Imaged painlessly, non-invasively through the skin)
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Darren N. Nesbeth retweeted
Join us for the Sequences of Tomorrow launch: Thu 29 Oct, 4.30–6.30pm, Newcastle City Library. Free entry, but registration is required. Reserve your place: eventbrite.co.uk/e/sequences…
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Darren N. Nesbeth retweeted
The Gates Foundation just funded DaltonTx to hunt TB drugs with AI. The plan: screen hundreds of essential M. tuberculosis genes computationally and find new chemical starting points. Proteome-scale screening, aimed at a disease the market ignores. 🔬
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Darren N. Nesbeth retweeted
If you're a Londoner working in Engineering Biology, there's only one place to be on 15 Oct, because the new season of @london_synbio events starts at UCL! Come for everything that's great about SynBio: theory, hardware, wet lab experiments, and of course networking w/ free food
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Darren N. Nesbeth retweeted
Excellent. More of this please.
Excellent. More of this please.
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Darren N. Nesbeth retweeted
Today, we expand zero-shot drug design beyond binding to the design of multifunctional medicines, the intracellular proteome, and state-of-the-art atomic precision with our model, JAM-2. In a new report (below), we show: 1. The first drug-grade, fully computationally designed multispecific antibodies against five peptide-MHCs: Routine picomolar T-cell activation/cell-killing EC50s, >100-fold selectivity, and drug-like developability 2. The first fully generatively designed, drug-grade dual-variant KRAS G12 multispecifics: They recruit primary T-cells from human donors to kill G12V and G12C presenting cells at pM to single-digit-nM potency, completely sparing wild-type. 3. Atomic accuracy, from sequence alone: Angstrom-level agreement between Cryo-EM and JAM-2 de novo designs, requiring only target sequences (not structure) as input. 4. Unrivaled speed with an AI-native in-house wet lab: Designed, built, and tested five programs in one parallelized campaign, end-to-end in-house in ~6 weeks. 5. A higher validation bar for AI-generated drug candidates: In a field increasingly rife with hype and uneven standards of proof, we provide the highest quality public wet-lab validation of AI-designed antibodies to date. We share experimental methods in full, and invite folks to adopt and build on these standards. Truly individualized therapies will be the most important contribution of AI in drug design. These advances help accelerate this future.
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Darren N. Nesbeth retweeted
Laura Dassama, PhD, assistant professor of microbiology and immunology and of chemistry, is developing a new therapy for patients who, like her, live with sickle cell disease. Hear her story on the Health Compass Podcast with Maya Adam. stan.md/4n8jD6y
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Darren N. Nesbeth retweeted
Synthetic Biology PhD studentship opportunity for October 2026 start. Full advert with application details here: findaphd.com/phds/project/ph…
PhD studentship opportunity! Join my group to engineer the biology of yeast for production of microbial palm oil at scale. Part of the SCALE IB programme lead by @billerbeck_s Includes extensive work with @cleanfoodgroup_ and 2ry supervision of Jose Jimenez Zarco @imperialcollege
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Darren N. Nesbeth retweeted
Where do "T" cells get their name? Until the 1960s, the thymus, a small butterfly-shaped organ inside the upper chest, had no known function. It went from being described as the “seat of the soul” in ancient times to a useless vestigial organ in the early 20th century. The thymus was known to house immune cells, but experiments in adult mice showed that removing it led to no defects in immune response. Its purpose remained elusive. But in 1961, Jacques Miller, then a PhD student at The Institute of Cancer Research in London, led a series of groundbreaking experiments. He discovered that removing the thymus in mice right after birth (instead of adulthood) rendered them quickly susceptible to infection. Miller ran further tests by transplanting skin from other mice strains and rats. Foreign skin should’ve triggered an immune response, but it didn’t. Miller had just proved that the thymus played a critical role in the immune system. He concluded that the thymus, at least at the time of birth, was the source of important immune cells that then migrated to other sites, where they remained and fought pathogens. These came to be known as “thymus-derived” cells, or T cells. Later research would show that T cells actually originate in the bone marrow as stem cells, but then travel to the thymus to mature. Cool fact: Miller is widely credited for being the last person to discover the function of a major human organ, and also the only living person to have done so. Image credits: nature.com/articles/s41418-0… health.harvard.edu/blog/got-…
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Darren N. Nesbeth retweeted
Congratulations to everyone who received their results last week. If you're joining us this Sept, welcome to UCL Arts and Humanities! We can't wait to welcome you. In the meantime, hear from our students about their experiences of studying at UCL. 🔗 buff.ly/LPATT7U
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Darren N. Nesbeth retweeted
Bug fix update to version 3.1.10.1 is live on the site. The Golden Gate dialog is working better now. Let me know if you have any other bugs or other problems.
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Darren N. Nesbeth retweeted
It’s Julian Dicks’ birthday today. So here he is unleashing Hell from the penalty spot at every opportunity…
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Synthetic Biology PhD studentship opportunity for October 2026 start. Full advert with application details here: findaphd.com/phds/project/ph…
PhD studentship opportunity! Join my group to engineer the biology of yeast for production of microbial palm oil at scale. Part of the SCALE IB programme lead by @billerbeck_s Includes extensive work with @cleanfoodgroup_ and 2ry supervision of Jose Jimenez Zarco @imperialcollege
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PhD studentship opportunity! Join my group to engineer the biology of yeast for production of microbial palm oil at scale. Part of the SCALE IB programme lead by @billerbeck_s Includes extensive work with @cleanfoodgroup_ and 2ry supervision of Jose Jimenez Zarco @imperialcollege
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Darren N. Nesbeth retweeted
No me había fijado que Nico Williams alcanza a dar la asistencia gracias al empujón que le da Nahuel Molina. JAJAAJAJJAAJJAJAJAJAJJAJ
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Darren N. Nesbeth retweeted
Nico Williams es campeón del mundo. Y tras la premiación, va directo a la tribuna a entregarle la medalla a su madre. Ella, que en 1994 salió de Ghana y cruzó parte del Sahara para poder llegar a España en busca de nuevas oportunidades. Una campeona más.
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