@bebatut

She/her. Researcher & Instructor in Bioinformatics. @openlifesci, @gxytraining. Mother. @bebatut@piaille.fr

 Auvergne, France
bebatut.fr/
Joined June 2011
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12 years of GalaxyP = 57 manuscripts + 50 workshops + 13 GTN Tutorials + 75 posters + more than 100 talks. galaxyp.org z.umn.edu/galaxypreferences training.galaxyproject.org/t… #Proteogenomics #Metaproteomics #Multiomics
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I’m proud to share that I received the best poster award at the ELIXIR 2024 All Hands Meeting ! 😃 doi.org/10.7490/f1000r… Thank you for a great event, let’s meet again at the 2024 ELIXIR Biohackathon in Barcelona in November 📅 #ELIXIR24 @IFB_Bioinfo
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Bérénice Batut retweeted
ELIXIR Europe@ELIXIREurope3 Apr 2024
📣Two new Communities have been formed in ELIXIR: 🔵 The #RDMCommunity - implementing #FAIR and #openscience principles. 🔵 The #MicrobiomeCommunity - enhancing research through standards for sequence analysis and multi-omics integration. Read more ⬇️ loom.ly/q4Rv4WY
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Bérénice Batut retweeted
Zamin Iqbal@ZaminIqbal11 Mar 2024
First step in a community project to provide a uniformly assembled, annotated and searchable set of bacterial genomes, our preprint on our initial release of 1.9 million genome assemblies+taxonomic estimates. (figure compares with previous 661k dataset) biorxiv.org/content/10.1101/…
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Online Hackathon to improve the annotation of @galaxyproject resources for microbial data analysis (and beyond): galaxyproject.org/events/202… 📆Date: March 11th - 15th 2024 📍Location: Online via Zoom & chat. 2 daily stand-ups 👥Participation: Free. Open to anyone, anywhere

Hackathon - Improving the annotation of Galaxy resources for microbial data analysis and beyond

This hackathon aims to improve the annotation of Galaxy resources for microbial data analysis and beyond

galaxyproject.org
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Bérénice Batut retweeted
Michael Schatz@mike_schatz14 Jan 2024
Now up Saskia Hiltemann presenting the Galaxy Training Network that provides tutorials, lectures, and training resources across hundreds of topics! @galaxyproject #PAG31 read more here: journals.plos.org/ploscompbi…
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Today was my last day in the Freiburg Galaxy Team @BackofenLab. Strange to leave after 7 years. It was an exciting & amazing opportunity to work & connect with great people & communities to build together. Thanks everyone, especially @bjoerngruening!
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But excited about the new adventures to come!
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Bérénice Batut retweeted
EMBL-EBI Training@EBItraining10 Nov 2023
Congratulations to team member Marta Lloret Llinares and all co-authors on your paper that's been published by @PLOSONE. Read 'An international consensus on effective, inclusive, and career-spanning short-format training in the life sciences and beyond': journals.plos.org/plosone/ar…
An image from the published article called 'The bicycle principles'. A wheel metaphor is given to the core principles and community principles in training.

ALT An image from the published article called 'The bicycle principles'. A wheel metaphor is given to the core principles and community principles in training.

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Bérénice Batut retweeted
BioNT@biont_training21 Sep 2023
⏰ Reminder: Join us for the second #BioNT workshop and unlock the power of Python! 🧬✨🚀👉shorturl.at/qDPW2 🗓️ Date: Nov 21, 2023 - Nov 24, 2023 ⏰ Workshop Time: 18:00 to 21:00 (CET) ⏳ Deadline: Oct 2, 2023 #LearningOpportunity #BioinfoWorkshop #DigitalLifeSciences
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Happy to share our latest work on integrating meta-omics data 📊 Excellent work by @val100420 to make this happen in #usegalaxy. Visit doi.org/10.1186/s40793-023-0…
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Interested in how @galaxyproject can be a powerful framework for #teaching? Stop by my poster #ISMBECCB2023 C-032 today or check it online: bit.ly/gtn-ismb-23 @gxytraining @Gallantries_EU
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You can find the full presentation here: bit.ly/ols-bosc-2023 & all links to Open Seeds and OLS: openlifesci.org/links

Batut-OLS-BOSC-short-talk

1 Open Seeds by OLS A virtual mentoring & training program for Open Science ambassadors Pradeep Eranti, Yo Yehudi, Sara El-Gebali, OLS team & community, Bérénice Batut BOSC at ISMB/ECCB - July 2023

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Bérénice Batut retweeted
GigaScience@GigaScience25 Jul 2023
Second #BOSC2023 keynote from Joseph Yracheta talking about @NativeBio and the dissonance between scientific altruism (#opendata) and capitalist extraction #ISMBECCB2023
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Bérénice Batut retweeted
BioNT@biont_training20 Jul 2023
⏰ Update: Exciting News! We extended the deadline for the first BioNT workshop to accommodate more participants. Don't miss this fantastic opportunity to unlock the power of RNA-seq analysis with @gxytraining! 🧬✨🚀👉shorturl.at/ewKUV ⏳ New Deadline: August 08, 2023
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