Multicellular modeling environment from TU Dresden. 👩‍🔬↔💻 News and support. Tweets by @wdeback
Dresden, Germany
Joined February 2018
- Tweets114
- Following1
- Followers117
- Likes32
morpheus retweeted
Check out the @EBItraining virtual course on "Mathematics of life" with spatial modelling and reproducible modelling. Including a Morpheus tutorial by @morpheus_lab/@zih_tud!
Have you just started in systems biology and want to learn more about the modelling approaches, tools and resources used? Join this hands-on training course which will guide you through these.
đź“…Apply by 02 July -
ebi.ac.uk/training/events/ma…
#Bioinformatics #Training
morpheus retweeted
New research from Beck and colleagues: "Stochastic simulations and parameter estimation for multiple-hitting T cells" - read it here: plos.io/2DVH2YV
morpheus retweeted
3/4 We @JanHasenauer lab @ICBMunich developed the #HPC ready tool #pyABC (github.com/icb-dcm/pyabc), with e.g. self-tuned distances and proposal kernels. Together with @morpheus_lab we develop the @FitMultiCell platform tailored to multi-cellular systems. #YoungScientistsHMGU
morpheus retweeted
Growing Neural Cellular Automata -- A new Distill article by @zzznah, @RandazzoEttore, @eyvindn and @drmichaellevin
distill.pub/2020/growing-ca/
morpheus retweeted
This week I will be teaching part of a Biophysics course @Fysikk_UniOslo focusing on the modeling and simulation of multicellular and multiscale systems using @morpheus_lab
morpheus retweeted
The 2nd #fitmulticell meeting in Heidelberg already showed great progress on the path to data-driven modeling of multi-cellular systems. Check out how we integrate #pyabc and @morpheus_lab at gitlab.com/fitmulticell!
morpheus retweeted
Happy to announce that pyABC version 0.9.15 is now available. The new release of this @HPC-ready @ParameterEstimation tool provides additional interfaces to external simulators, enhanced visualisation capabilities and a more detailed documentation.
github.com/ICB-DCM/pyABC/rel…
morpheus retweeted
I recommend you @morpheus_lab those type of simulations can be run with very little effort. You can start here: morpheus.gitlab.io/blog/2018…
morpheus retweeted
BTW: Morpheus's SBML capabilities have been extensively validated using the SBML Test Suite. @sbmlnews
sbml.org/Facilities/Database…
morpheus retweeted
New InitPoissonDisc and InitVoronoi plugins in Morpheus 2.1 allow you to initialize your cells as an epithelial-like tissues. Blog post:
morpheus.gitlab.io/blog/2019…
morpheus retweeted
Morpheus 2.1 brings greatly improved SBML support, adaptive ODE solvers and new cell initializers. Blog post on new SBML import features:
morpheus.gitlab.io/blog/2019…
morpheus retweeted
Out today in @NatComms: spreading of HIV among T-cells is shifted from cell-free to cell-cell in 3D collagen gels. Denser gels are more efficient because cell-cell contacts last longer (25 min required). Great collaboration within #SFB1129 nature.com/articles/s41467-0…
morpheus retweeted
Really cool work! - From Energy to Cellular Force in the Cellular Potts Model biorxiv.org/content/10.1101/…
morpheus retweeted
Will talk on @morpheus_lab in the tutorial on #sysbio simulation tools organized by the @combine_coord and @denbiOffice at the ENS in rainy Lyon.
morpheus retweeted
Thanks @morpheus_lab for this update! I'm excited to see that you've implemented our protrusion model (dx.doi.org/journal.pcbi.1004…)! Can't wait to try it out.
It is out! The new 🎉 Morpheus v2 🎉 is now available for Windows, Mac OSX and Linux. An overview of all the goodies in this new blog post: morpheus.gitlab.io/blog/2018… Please upgrade and spread the word.