@stencila

Documents with scientific intelligence. Tools for generative AI in scientific authoring and collaboration. Made by scientists, for scientists.

stencila.io
Joined May 2012
  • Tweets508
  • Following721
  • Followers916
79Media
Which scientific publishers/journals are worst affected by fraudulent or dubious research papers, and which have done least to clean up their portfolio? A science-integrity startup says it has answers - here's an exclusive look at the figures @Nature 🧵/1 nature.com/articles/d41586-0…

Journals with high rates of suspicious papers flagged by science-integrity start-up

Nature - Scitility’s tool Argos identifies work whose authors have a record of misconduct.

nature.com
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neuron trying in vain to find and connect with other neurons
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As the author of this PDF, it's been interesting seeing people guess at the rationale behind its design. However, the rationale had nothing to do with theory vs practice, and everything to do with pragmatically coping with an unaccommodated disability in academia. (1/16)
Deedy
@deedydas16 Oct 2024
Compilers was was known to be the hardest CS class at Cornell which was hard as it is. We were handed a 8-page PDF at the start of sem for a language spec we'd be implementing by the end of sem, split into 6 parts. On part 5, the median was a 0/100 and most the class failed.
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Introducing Meta’s Open Materials 2024 (OMat24) Dataset and Models! All under permissive open licenses for commercial and non-commercial use! Paper: arxiv.org/abs/2410.12771 Dataset: huggingface.co/datasets/fair… Models: huggingface.co/fairchem/OMAT… 🧵1/x
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We're soft launching the Open Source Software in Higher Education survey during the #EDUCAUSE Annual Conference (#EDU24) next week. Add your insights as an #HigherEd IT leader to help understand #OpenSource in #HigherEducation today. forms.gle/pjydj64ppSrT3FyK8

Understanding open source software use and communities across campuses.

The Apereo Foundation is partnering with non-profit open source software organizations, professional associations serving higher education, and corporate leaders supporting educational technology, to...

docs.google.com
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Bulky pastas—like farfalle and fusilli—require more packaging than thinner varieties, making them trickier to transport and leading to more waste. 🍝 On #NationalPastaDay, learn more about a different twist on pasta dough that could help reshape food manufacturing, according to a @ScienceAdvances study. bit.ly/4dQFHhB
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"Make interoperability legal again" #TheTechWeWant @OKFN 😂
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📢 @project_solid will have a new organisational home @ODIHQ - pairing their expertise of the data spectrum with pro-human technology to build a global data infrastructure that stimulates creativity, encourages collaboration and fosters compassion - my original hope for the web.
Open Data Institute@ODIHQ17 Oct 2024
Replying to @ODIHQ
From October 2024 we’re bringing @project_solid into our broader data stewardship activities. The project, protocol, and community will become part of @ODIHQ activities to promote secure, ethical #data sharing and build a more transparent, and user-centric data ecosystem
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Last week, biochemist David Baker won a #NobelPrize for ground-breaking work designing entirely new proteins. In collaboration with imaging expert Julia Mahamid, this prize-winning tech is being used to create protein probes to see new details in cells czi.co/3Nvxu7G

Nobel Laureate David Baker, Colleagues Design Proteins for Advanced Microscopy

Nobel Laureate David Baker is collaborating with electron microscopy expert Julia Mahamid to design self-assembling protein probes

chanzuckerberg.com
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SUSTAINABILITY: When Being Small Is Big Enough To Create A Legacy buff.ly/484N83g via @scholarlykitchn #SDGs #Publishing #Sustainability "Every smaller publisher has stories of inspiration, realization, and impact to tell the world."

Sustainability: When Being Small Is Big Enough To Create A Legacy - The Scholarly Kitchen

How can smaller publishers support the Sustainable Development Goals?

scholarlykitchen.sspnet.org
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The Curated Cancer Cell Atlas: comprehensive characterisation of tumours at single-cell resolution | bioRxiv biorxiv.org/content/10.1101/…

The Curated Cancer Cell Atlas: comprehensive characterisation of tumours at single-cell resolution

Single-cell RNA-seq (scRNA-seq) has transformed the study of cancer biology. Recent years have seen a rapid expansion in the number of single-cell cancer studies, yet most of these studies profiled...

biorxiv.org
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And they cost ~1% of journal articles (~0.01% of research). So whatever you think of peer review (we need more vs less vs different vs none), supporting a mechanism that provides rapid and universal free access to knowledge should be a no-brainer journals.plos.org/plosbiolog…

Plan U: Universal access to scientific and medical research via funder preprint mandates

Preprint servers are a low-cost mechanism for providing free access to research findings, and can also significantly accelerate research itself by making results available immediately. This Perspec...

journals.plos.org
Alfonso Martinez Arias@AMartinezArias12 Oct 2024
#Preprints are important and valued in (most) job and fellowship applications. Also, they are the best currency for exchange of information, feedback and proof of what we are doing with funding.
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still learning how to explore these large microsopy datasets. new trick: letting claude write small interactive UIs, customized to our data. happy to hear your tips!!
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🚀 Exciting updates to Infra Finder are here! Discover #OpenInfrastructures with new filtering options, and providers can now update their data more easily🔎✨ We want your feedback! Take our in-app survey and help us make Infra Finder even better.💬 investinopen.org/blog/help-s…

Help Shape the Future of Infra Finder: Explore New Features and Share Your Feedback

Explore the latest enhancements to Infra Finder, including expanded filtering options and self-service updates, and share your feedback through our quick in-app survey to help us improve.

investinopen.org
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Stencila retweeted
nature
@Nature25 Jul 2024
Nature research paper: AI models collapse when trained on recursively generated data go.nature.com/3SmkYdy

AI models collapse when trained on recursively generated data

Nature - Analysis shows that indiscriminately training generative artificial intelligence on real and generated content, usually done by scraping data from the Internet, can lead to a collapse in...

nature.com
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I will have a short slot talking about @RiverValley1000's implementation of the "Executable Research Article" using @stencila. Tomorrow, 4pm GMT. #OpenScience
eLife Innovation@eLifeInnovation15 Nov 2021
Curious to hear more about what you can do with your scientific paper? Join the eLife Innovation event at #OpenPublish Fest, we will be demoing new ways to enrich your research paper with code and data! Register here 👇 to participate: elifesciences.org/events/bc4…
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Our partnership with @Stencila led to the truly web-native Executable Research Article (ERA) that brings a new level of interactivity to published research. We’re now working to make ERAs accessible to even more researchers and publishers #eLifeInnovation elifesciences.org/labs/a04d2…

Announcing the next phase of Executable Research Articles

eLife and Stencila renew their partnership to make Executable Research Articles accessible to even more researchers and publishers.

elifesciences.org
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Do you work with #Jupyter or #RMarkdown? Showcase your code and interactive figures by publishing an Executable Research Article (ERA). Find out more about ERAs and how to get started ⬇️ elifesciences.org/labs/dc5ac…

Welcome to a new ERA of reproducible publishing

New open-source technology lets eLife authors publish Executable Research Articles that treat live code and data as first-class citizens.

elifesciences.org
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We’re hiring! Come join our team as the first Research Data Analyst, + help explore the costs of #openinfra & current funding landscape. This is a full-time role. Salary range $65k-75k w/ benefits. Our thanks to @MellonFdn for making this possible! investinopen.org/blog/mellon…

Mellon Foundation grant to support investigation into hidden costs of open infrastructure

New funding from The Andrew W. Mellon Foundation will support research and analysis into the hidden costs of open infrastructure. Hiring is now open for IOI's first Research Data Analyst.

investinopen.org
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Want to learn how Executable Research Articles (ERAs) are taking published research to a new level of transparency, reproducibility and interactivity? Join us for our talk at the #CollabW21 workshop, organised by @SoftwareSaved Register here: elifesciences.org/events/f72…
Join us at collaborations workshop 2021 to learn more about executable research articles. Live Thursday, March 30th at 11:45 am BST

ALT Join us at collaborations workshop 2021 to learn more about executable research articles. Live Thursday, March 30th at 11:45 am BST

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