WDL (pronounced widdle) is a workflow definition language designed from the ground up as a human-readable and -writable way to express tasks and workflows.
Massachusetts, USA
Joined July 2016
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WDL Dev Team retweeted
Very cool to see Cromwell on Azure 1.0.0 released on GitHub! github.com/microsoft/Cromwel…
WDL Dev Team retweeted
Earlier this month, we released Cromwell on Azure, an open-source project on GitHub from Microsoft Genomics that provides scientific workflow management for genetic analysis. lnkd.in/eGdRHGz #MSFTAdvocate
WDL Dev Team retweeted
Nice overview of bioinformatics workflows definition and execution including discussion of @commonwl @galaxyproject and @WDL_dev
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WDL Dev Team retweeted
Explore a WDL workflow on Dockstore by choosing between classic and EPAM visualizations.
dockstore.org/workflows/gith…
ALT Classic view
ALT EPAM View
WDL Dev Team retweeted
Did you know our 1.6.0 release back in April lets you launch WDL workflows via @TerraBioApp now? Browse our workflows at dockstore.org/search?descrip… and try it out!
WDL Dev Team retweeted
Would anyone in the Boston/Cambridge area be interested in an informal meetup about GATK? Chat about current tools, go over a few practical examples of how things work, comment on development roadmap (next features coming down the pipe) etc? If so, when/where?
62%During working hours
12%After hours office space
25%After hours social space
8 votes • Final results WDL Dev Team retweeted
Win a trip to @OBF_BOSC this summer in Basel! – at Cambridge, MA
Do you have a pet workflow or a favorite notebook? Have you thought about sharing them with the world, but keep pushing it off? Here is your opportunity to do just that! To learn how, check out terra.bio/tosc
WDL Dev Team retweeted
We had a hackathon yesterday to make the AWS support in Cromwell. A lot of great progress was made, the next release should be exciting for the AWS users :)
WDL Dev Team retweeted
It appears Cromwell has reached "bar graffiti" status. Onwards and upwards, Jamie!
WDL Dev Team retweeted
GitHub sandbox project for creating and running
@WDL_dev pipelines in Cromwell: github.com/ecerami/wdl_sandb…. Runs locally and via @googlecloud Genomics API. Actually got to do some real coding over the past few weeks...!
WDL Dev Team retweeted
If you maintain @WDL_dev workflows, "miniwdl check" can speed up your code/test/debug loop by detecting mistakes and oversights through static code analysis. Covers task shell scripts as well as WDL wiring. Early days; give it a try and file issues: github.com/chanzuckerberg/mi…
WDL Dev Team retweeted
On my way home after a fabulous @gatk_dev workshop in Copenhagen. Looking forward to get started implementing #GATK4 in our clinical workflow back home. Also really impressed by #WDL, #Cromwell, and #FireCloud. Will definitely try running “FiveDollarGenome” on my own genome data.
WDL Dev Team retweeted
CY: Took 2 years, but today would only take 6 months due to availability of CWL, WDL, Cromwell, Kubernetes, Dockstore, and other technologies. #ASHG18
WDL Dev Team retweeted
Next Monday, join us for some great tech talks at @broadinstitute!
ow.ly/JRmA50iaYev
WDL Dev Team retweeted
.@boconnor Analyze, "green box" for @humancellatlas, WDL-based workflows, contribute pipelines, use benchmark data pipeline-tools.readthedocs.i… #GCCBOSC
WDL Dev Team retweeted
@boconnor describes the Green Box, the analysis component of the Human Cell Atlas Data Coordination Platform using #WDL_dev and #DockstoreOrg
